Managing small populations—using genetic data and trial translocations to help inform suitable conservation measures for the alpine blue-sowthistle (Cicerbita alpina) in Scotland

Habitat fragmentation is causing an increasing amount of species loss around the world and creates problems at the population level. Many species are left as only small and isolated populations, which are vulnerable to genetic erosion and inbreeding depression. Here we present a study on the alpine blue-sowthistle (Cicerbita alpina). Due to intensive grazing the species is very rare in Scotland, where it occurs at only four small, montane sites, has never been reported to reproduce and is in need of conservation interventions. As the species can grow clonally it is unknown how many individuals remain and whether populations are affected by genetic isolation. We (1) quantified genetic diversity, inbreeding and between-population differentiation in Scotland and Norway using 15 microsatellite loci, and (2) experimentally translocated plants to new sites. Genetic diversity in Scotland was low (HE: 0.35; Allelic Richness: 1.84; 4 sites) compared to Norway (HE: 0.52; Allelic Richness: 2.56; 5 sites). The transplants were able to grow at new sites and are therefore not restricted to steep, montane ledges. While grazing is likely to be the main factor preventing range expansion, long-term genetic isolation has possibly further lowered population viability. To avoid local extinction of this species, conservation translocations and genetic rescue might be appropriate conservation interventions, but this needs to be further tested in a controlled environment and away from wild sites to avoid potential risks of outbreeding depression. conservation genetics, translocations, gene flow, microsatellites, grazing, Scotland, AsteraceaepublishedVersio

Rubber's inclusion in zero‐deforestation legislation is necessary but not sufficient to reduce impacts on biodiversity

Agricultural commodity production is a major driver of tropical deforestation and biodiversity loss. Natural rubber from Hevea brasiliensis, a valuable commodity without viable substitutes, has recently been included in the European Union (EU) deforestation regulation that aims to halt imports of goods containing embedded deforestation. Sustained growth in demand for rubber is driven by increasing tire production, caused by rising transport flows and personal car ownership. We show that average natural rubber yields remain static, meaning 2.7–5.3 million ha of additional plantations could be needed by 2030 to meet demand. A systematic literature search identified 106 case studies concerning transitions to and from rubber, revealing that substantial rubber plantation area expansion since 2010 has occurred at the expense of natural forest. Eliminating deforestation from rubber supply chains requires support for millions of smallholder growers to maintain or increase production from existing plantations, without land or water degradation. Supply chain traceability efforts offer opportunities to deliver such support. While the inclusion of rubber in EU legislation is a positive step, it is critical to ensure that smallholders are not marginalized to avoid exacerbating poverty, and that other markets follow suit to avoid displacement of rubber-driven deforestation to unregulated markets

Airborne based spectroscopy of red and far-red sun-induced chlorophyll fluorescence: Implications for improved estimates of gross primary productivity

Remote sensing (RS) approaches commonly applied to constrain estimates of gross primary production (GPP) employ greenness-based vegetation indices derived from surface reflectance data. Such approaches cannot capture dynamic changes of photosynthesis rates as caused by environmental stress. Further, applied vegetation indices are often affected by background reflectance or saturation effects. Sun. induced chlorophyll fluorescence (F) provides the most direct measure of photosynthesis and has been recently proposed as a new RS approach to improve estimates of GPP and tracing plant stress reactions. This work aims to provide further evidence on the complementary information content of F and its relation to changes in photosynthetic activity compared to traditional RS approaches. We use the airborne imaging spectrometer HyPlant to obtain several F products including red fluorescence (F687), far-red fluorescence (F760), F760 yield (F760yield) and the ration between F687 and F760 (Fratio). We calculate several vegetation indices indicative for vegetation greenness. We apply a recently proposed F-based semi-mechanistic approach to improve the forward modeling of GPP using F760 and compare this approach with a traditional one based on vegetation greenness and ground measurements of GPP derived from chamber measurements. In addition, we assess the sensitivity of F760yield and Fratio for environmental stress. Our results show an improved predictive capability of GPP when using F760 compared to greenness-based vegetation indices. F760yield and Fratio show a strong variability in time and between different crop types suffering from different levels of water shortage, indicating a strong sensitivity of F products for plant stress reactions. We conclude that the new RS approach of F provides complements to the set of commonly applies RS: The use of F760 improves constraining estimates of GPP while the ratio of red and far-red F shows large potential for tracking spatio-temporal plant adaptation in response to environmental stress conditions

Lipidomics needs more standardization

Modern mass spectrometric technologies provide quantitative readouts for a wide variety of lipid specimens. However, many studies do not report absolute lipid concentrations and differ vastly in methodologies, workflows, and data presentation. Therefore, we appeal to researchers to engage with the Lipidomics Standards Initiative to develop common standards for minimum acceptable data quality and reporting for lipidomics data to take lipidomics research to the next level

Scotland’s biodiversity progress to 2020 Aichi Targets:Conserving genetic diversity- development of a national approach for addressing Aichi Biodiversity Target 13 that includes wild species

Aichi Target 13 (T13) focuses on the conservation of genetic diversity. •Major challenges in implementing T13 are that the type of genetic diversity to conserve is not clearly defined, and that key issues in genetic conservation vary across different sectors (e.g., forestry vs agriculture vs other species of socio-economic importance). •In Scotland and the UK more widely, baseline mechanisms are well established for assessing and reporting on genetic diversity in species of agricultural importance (e.g., rare livestock breeds, crop wild relatives), and a methodology has been established for ornamental plants. •A new UK Strategy for Forest Genetics Resources was launched in 2019, creating a framework for linking forest trees into T13 reporting. •However, there is no clear strategy to deal with ‘other species of socio-economic importance’ in Scotland, the UK or indeed elsewhere, and addressing this gap is the major focus of this report. •There is a lack of guidance for identifying focal species of socio-economic importance, and no clear mechanism for addressing T13 for these species once they have been identified. •To address this, we have identified a set of criteria for defining terrestrial and freshwater species of socio-economic importance in Scotland, and selected an initial list of 26 species. •The criteria applied were: -National conservation priority wild species. -Species of national cultural importance. -Species providing key ecosystem services. -Species of importance for wild harvesting (food and medicine). -Economically important game species. •We then developed a simple, readily applicable scorecard method for assessing risks to the conservation of genetic diversity in these species. •The scorecard approach is not dependent on prior genetic knowledge, and instead uses structured expert opinion assessments of whether: -Demographic declines are likely to lead to loss of genetic diversity (genetic erosion). -Hybridisation is likely to lead to undesirable replacement of genetic diversity. -Restrictions to regeneration/turnover are likely to impede evolutionary change. •For plant species where seed-banking is a viable mechanism for holding genetic resources ex situ,we also report on the representativeness of these ex situ collections. •Overall, this scorecard provides a mechanism for incorporating ‘other species of socio-economic importance’ into T13 actions and reporting. •Furthermore, its application is not restricted to Aichi T13 as the approach is designed as a generic scorecard for genetic diversity. It is thus relevant to post-2020 CBD targets focusing on genetic diversity. •Future priorities include: -Extension to other species of socio-economic, commercial and cultural importance (with the inclusion of marine species being a particularly high priority). -Harmonising genetic conservation strategies between sectors (drawing on commonalities), whilst minimising disruption of existing well-established methodologies within sectors. -Greater incorporation of genomic data into monitoring genetic diversity (particularly in the agricultural and forestry sectors where data availability is potentially high)

Mild hyperlipidemia in mice aggravates platelet responsiveness in thrombus formation and exploration of platelet proteome and lipidome.

Hyperlipidemia is a well-established risk factor for cardiovascular diseases. Millions of people worldwide display mildly elevated levels of plasma lipids and cholesterol linked to diet and life-style. While the prothrombotic risk of severe hyperlipidemia has been established, the effects of moderate hyperlipidemia are less clear. Here, we studied platelet activation and arterial thrombus formation in Apoe-/- and Ldlr-/- mice fed a normal chow diet, resulting in mildly increased plasma cholesterol. In blood from both knockout mice, collagen-dependent thrombus and fibrin formation under flow were enhanced. These effects did not increase in severe hyperlipidemic blood from aged mice and upon feeding a high-fat diet (Apoe-/- mice). Bone marrow from wild-type or Ldlr-/- mice was transplanted into irradiated Ldlr-/- recipients. Markedly, thrombus formation was enhanced in blood from chimeric mice, suggesting that the hyperlipidemic environment altered the wild-type platelets, rather than the genetic modification. The platelet proteome revealed high similarity between the three genotypes, without clear indication for a common protein-based gain-of-function. The platelet lipidome revealed an altered lipid profile in mildly hyperlipidemic mice. In conclusion, in Apoe-/- and Ldlr-/- mice, modest elevation in plasma and platelet cholesterol increased platelet responsiveness in thrombus formation and ensuing fibrin formation, resulting in a prothrombotic phenotype

Targeted vertebrate surveys enhance the faunal importance and improve explanatory models within the Eastern Arc Mountains of Kenya and Tanzania

Detailed knowledge of species distributions, endemism patterns and threats is critical to site prioritization and conservation planning. However, data from biodiversity inventories are still limited, especially for tropical forests, and even well recognized hotspots remain understudied. We provide an example of how updated knowledge on species occurrence from strategically directed biodiversity surveys can change knowledge on perceived biodiversity importance, and facilitate understanding diversity patterns and the delivery of conservation recommendations.Francesco Rovero, Michele Menegon, Jon Fjeldså, Leah Collett, Nike Doggart, Charles Leonard, Guy Norton, Nisha Owen, Andrew Perkin, Daniel Spitale, Antje Ahrends and Neil D. Burges